Pseudomonas fluorescens F113, PSF113_3749 (nirL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3749
Name
nirL
Replicon chromosome
Genomic location 4436728 - 4437240 (- strand)

Cross-References

RefSeq YP_005209145.1
GI 378951657
Entrez 11831844
INSDC AEV63750.1
NCBI Locus Tag PSF113_3749
UniParc UPI00023B44C6
UniProtKB Acc G8QCN2
UniProtKB ID G8QCN2_PSEFL
UniRef100 UniRef100_G8QCN2
UniRef50 UniRef50_P95413
UniRef90 UniRef90_G8QCN2

Product

Feature Type CDS
Coding Frame 1
Product Name
protein NirL
Synonyms
Evidence for Translation
Charge (pH 7) 1.58
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 19.3
Isoelectric Point (pI) 7.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000499 (354 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3749
Search term: nirL
Search term: protein NirL

Human Homologs

References

No references are associated with this feature.