Pseudomonas fluorescens F113, PSF113_3750 (nirD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3750
Name
nirD
Replicon chromosome
Genomic location 4437237 - 4437695 (- strand)

Cross-References

RefSeq YP_005209146.1
GI 378951658
Entrez 11831845
INSDC AEV63751.1
NCBI Locus Tag PSF113_3750
UniParc UPI00023B44C7
UniProtKB Acc G8QCN3
UniProtKB ID G8QCN3_PSEFL
UniRef100 UniRef100_G8QCN3
UniRef50 UniRef50_Q52522
UniRef90 UniRef90_G8QCN3

Product

Feature Type CDS
Coding Frame 1
Product Name
protein NirD
Synonyms
Evidence for Translation
Charge (pH 7) -4.42
Kyte-Doolittle Hydrophobicity Value -0.158
Molecular Weight (kDa) 16933.1
Isoelectric Point (pI) 5.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 124 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000500 (354 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3750
Search term: nirD
Search term: protein NirD

Human Homologs

References

No references are associated with this feature.