Pseudomonas fluorescens F113, PSF113_4420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4420
Name
Replicon chromosome
Genomic location 5160959 - 5161672 (+ strand)

Cross-References

RefSeq YP_005209807.1
GI 378952319
EC Number 6.3.3.1
Entrez 11832521
INSDC AEV64412.1
NCBI Locus Tag PSF113_4420
UniParc UPI00023B4716
UniProtKB Acc G8Q5L8
UniProtKB ID G8Q5L8_PSEFL
UniRef100 UniRef100_G8Q5L8
UniRef50 UniRef50_G8Q5L8
UniRef90 UniRef90_G8Q5L8

Product

Feature Type CDS
Coding Frame 1
Product Name
isoprenoid biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.45
Kyte-Doolittle Hydrophobicity Value -0.359
Molecular Weight (kDa) 26.4
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 40 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000909 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4420

Human Homologs

References

No references are associated with this feature.