Pseudomonas fluorescens F113, PSF113_5352

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5352
Name
Replicon chromosome
Genomic location 6187246 - 6187917 (- strand)

Cross-References

RefSeq YP_005210719.1
GI 378953231
EC Number 2.7.7.-
Entrez 11833467
NCBI Locus Tag PSF113_5352

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleotidyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -6.14
Kyte-Doolittle Hydrophobicity Value -0.058
Molecular Weight (kDa) 24162.4
Isoelectric Point (pI) 6.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 611 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000580 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5352

Human Homologs

Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 1.8e-22
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 1.8e-22
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 1.8e-22
Percent Identity: 31.8

References

No references are associated with this feature.