Pseudomonas fluorescens F113, PSF113_5485 (pgk)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5485
Name
pgk
Replicon chromosome
Genomic location 6349151 - 6350314 (- strand)

Cross-References

RefSeq YP_005210852.1
GI 378953364
Entrez 11833604
INSDC AEV65457.1
NCBI Locus Tag PSF113_5485
UniParc UPI00023B4402
UniProtKB Acc G8Q2I7
UniProtKB ID G8Q2I7_PSEFL
UniRef100 UniRef100_G8Q2I7
UniRef50 UniRef50_P43726
UniRef90 UniRef90_Q88AK3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -13.11
Kyte-Doolittle Hydrophobicity Value 0.251
Molecular Weight (kDa) 40181.7
Isoelectric Point (pI) 4.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6HXE TRANSFERASE 10/17/18 Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18 in complex with 3-phosphoglycerate Pseudomonas sp. 'TAC II 18' 2.1 X-RAY DIFFRACTION 93.5
6I06 TRANSFERASE 10/25/18 Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18 Pseudomonas 2 X-RAY DIFFRACTION 93.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000536 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5485
Search term: pgk

Human Homologs

Ensembl 110, assembly GRCh38.p14
phosphoglycerate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8896]
E-value: 3.3e-67
Percent Identity: 38.3

References

No references are associated with this feature.