Pseudomonas fluorescens SBW25, PFLU0018 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0018
Name
def
Replicon chromosome
Genomic location 20984 - 21490 (- strand)

Cross-References

RefSeq YP_002869715.1
GI 229587596
EC Number 3.5.1.88
Entrez 7817338
INSDC CAY46303.1
UniParc UPI00019D9B08
UniProtKB Acc C3KE48
UniProtKB ID C3KE48_PSEFS
UniRef100 UniRef100_I4L361
UniRef50 UniRef50_Q9KVU3
UniRef90 UniRef90_I2BLG3

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -5.13
Kyte-Doolittle Hydrophobicity Value -0.337
Molecular Weight (kDa) 19.4
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000019 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0018
Search term: def

Human Homologs

References

No references are associated with this feature.