Pseudomonas fluorescens SBW25, PFLU5787

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5787
Name
Replicon chromosome
Genomic location 6336978 - 6337649 (- strand)

Cross-References

RefSeq YP_002875276.1
GI 229593157
Entrez 7821581
INSDC CAY53185.1
UniParc UPI00019DAF03
UniProtKB Acc C3K3N0
UniProtKB ID C3K3N0_PSEFS
UniRef100 UniRef100_C3K3N0
UniRef50 UniRef50_Q4K4B1
UniRef90 UniRef90_C3K3N0

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.62
Kyte-Doolittle Hydrophobicity Value -0.103
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 120 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000358 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5787

Human Homologs

References

No references are associated with this feature.