Pseudomonas putida GB-1, PputGB1_0093

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0093
Name
Replicon chromosome
Genomic location 100650 - 102167 (- strand)

Cross-References

RefSeq YP_001666345.1
GI 167031114
Entrez 5867781
INSDC ABY96009.1
NCBI Locus Tag PputGB1_0093
UniParc UPI000164C05D
UniProtKB Acc B0KFV8
UniProtKB ID B0KFV8_PSEPG
UniRef100 UniRef100_B0KFV8
UniRef50 UniRef50_Q48QH2
UniRef90 UniRef90_Q88RQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
choline-sulfatase
Synonyms
Evidence for Translation
Charge (pH 7) -13.66
Kyte-Doolittle Hydrophobicity Value -0.435
Molecular Weight (kDa) 57443.5
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 274 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000031 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0093
Search term: choline-sulfatase

Human Homologs

Ensembl 110, assembly GRCh38.p14
iduronate 2-sulfatase [Source:HGNC Symbol;Acc:HGNC:5389]
E-value: 1.0e-28
Percent Identity: 27.6

References

No references are associated with this feature.