Pseudomonas putida GB-1, PputGB1_5410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_5410
Name
Replicon chromosome
Genomic location 6039201 - 6040406 (- strand)

Cross-References

RefSeq YP_001671627.1
GI 167036396
Entrez 5873225
INSDC ABZ01292.1
NCBI Locus Tag PputGB1_5410
UniParc UPI0000F258E0
UniProtKB Acc B0KR87
UniProtKB ID B0KR87_PSEPG
UniRef100 UniRef100_B0KR87
UniRef50 UniRef50_Q14HK8
UniRef90 UniRef90_Q88C22

Product

Feature Type CDS
Coding Frame 1
Product Name
cobalamin synthesis protein P47K
Synonyms
Evidence for Translation
Charge (pH 7) -21.96
Kyte-Doolittle Hydrophobicity Value -0.271
Molecular Weight (kDa) 45436.0
Isoelectric Point (pI) 4.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 365 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005068 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_5410

Human Homologs

Ensembl 110, assembly GRCh38.p14
Zn regulated GTPase metalloprotein activator 1B [Source:HGNC Symbol;Acc:HGNC:17907]
E-value: 1.5e-30
Percent Identity: 31.8

References

No references are associated with this feature.