Pseudomonas putida S16, PPS_0025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0025
Name
Replicon chromosome
Genomic location 29602 - 30120 (+ strand)

Cross-References

RefSeq YP_004699494.1
GI 339484966
Entrez 10935697
INSDC AEJ10614.1
NCBI Locus Tag PPS_0025
UniParc UPI0002172344
UniProtKB Acc F8FU64
UniProtKB ID F8FU64_PSEP6
UniRef100 UniRef100_F8FU64
UniRef50 UniRef50_A0A085JPA2
UniRef90 UniRef90_B1J427

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-3-methyladenine glycosylase I
Synonyms
Evidence for Translation
Charge (pH 7) 0.89
Kyte-Doolittle Hydrophobicity Value -0.249
Molecular Weight (kDa) 19598.4
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 355 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000010 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0025

Human Homologs

References

No references are associated with this feature.