Pseudomonas putida S16, PPS_0030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_0030
Name
Replicon chromosome
Genomic location 34177 - 35109 (- strand)

Cross-References

RefSeq YP_004699499.1
GI 339484971
Entrez 10935702
INSDC AEJ10619.1
NCBI Locus Tag PPS_0030
UniParc UPI0002172349
UniProtKB Acc F8FU69
UniProtKB ID F8FU69_PSEP6
UniRef100 UniRef100_A0A099N6G1
UniRef50 UniRef50_Q88RR2
UniRef90 UniRef90_Q88RR2

Product

Feature Type CDS
Coding Frame 1
Product Name
methionyl-tRNA formyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -4.64
Kyte-Doolittle Hydrophobicity Value 0.028
Molecular Weight (kDa) 32.9
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 603 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000018 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_0030

Human Homologs

References

No references are associated with this feature.