Pseudomonas putida S16, PPS_1830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1830
Name
Replicon chromosome
Genomic location 2049121 - 2049525 (+ strand)

Cross-References

RefSeq YP_004701279.1
GI 339486751
Entrez 10937482
INSDC AEJ12399.1
NCBI Locus Tag PPS_1830
UniParc UPI00021734C9
UniProtKB Acc F8FW65
UniProtKB ID F8FW65_PSEP6
UniRef100 UniRef100_A0A099MZB0
UniRef50 UniRef50_Q4KDI0
UniRef90 UniRef90_Q1I7V0

Product

Feature Type CDS
Coding Frame 1
Product Name
TraR/DksA family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -12.34
Kyte-Doolittle Hydrophobicity Value -0.512
Molecular Weight (kDa) 15.3
Isoelectric Point (pI) 4.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 301 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005069 (526 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1830

Human Homologs

References

No references are associated with this feature.