Pseudomonas putida S16, PPS_2555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2555
Name
Replicon chromosome
Genomic location 2851405 - 2852412 (- strand)

Cross-References

RefSeq YP_004701994.1
GI 339487466
Entrez 10938197
INSDC AEJ13114.1
NCBI Locus Tag PPS_2555
UniParc UPI000217383D
UniProtKB Acc F8FSH6
UniProtKB ID F8FSH6_PSEP6
UniRef100 UniRef100_A0A099N0R3
UniRef50 UniRef50_I7B3J9
UniRef90 UniRef90_I7B3J9

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.05
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 37.1
Isoelectric Point (pI) 8.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3GRA Transcription regulator 03/25/09 Crystal structure of AraC family transcriptional regulator from Pseudomonas putida Pseudomonas putida 2.3 X-RAY DIFFRACTION 96.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 381 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001516 (480 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2555

Human Homologs

References

No references are associated with this feature.