Pseudomonas putida S16, PPS_4056

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4056
Name
Replicon chromosome
Genomic location 4579425 - 4580192 (- strand)

Cross-References

RefSeq YP_004703477.1
GI 339488949
Entrez 10939680
INSDC AEJ14597.1
NCBI Locus Tag PPS_4056
UniParc UPI00021730F5
UniProtKB Acc F8G0L9
UniProtKB ID F8G0L9_PSEP6
UniRef100 UniRef100_F8G0L9
UniRef50 UniRef50_Q9I3N5
UniRef90 UniRef90_Q4KG25

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c-type biogenesis protein CcmC
Synonyms
Evidence for Translation
Charge (pH 7) 8.58
Kyte-Doolittle Hydrophobicity Value 0.757
Molecular Weight (kDa) 28352.7
Isoelectric Point (pI) 9.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 254 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001392 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4056

Human Homologs

References

No references are associated with this feature.