Pseudomonas putida S16, PPS_4805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4805
Name
Replicon chromosome
Genomic location 5447070 - 5447399 (- strand)

Cross-References

RefSeq YP_004704214.1
GI 339489686
Entrez 10940417
INSDC AEJ15334.1
NCBI Locus Tag PPS_4805
UniParc UPI0002173693
UniProtKB Acc F8FU43
UniProtKB ID F8FU43_PSEP6
UniRef100 UniRef100_V9X2U2
UniRef50 UniRef50_A0A0D0TRX2
UniRef90 UniRef90_B0KLY5

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -1.87
Kyte-Doolittle Hydrophobicity Value -0.071
Molecular Weight (kDa) 11.7
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000538 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4805
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.