Pseudomonas putida S16, PPS_4958

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4958
Name
Replicon chromosome
Genomic location 5629177 - 5630667 (+ strand)

Cross-References

RefSeq YP_004704365.1
GI 339489837
Entrez 10940568
INSDC AEJ15485.1
NCBI Locus Tag PPS_4958
UniParc UPI0002173AE9
UniProtKB Acc F8FWT9
UniProtKB ID F8FWT9_PSEP6
UniRef100 UniRef100_A0A099N774
UniRef50 UniRef50_Q4K4B6
UniRef90 UniRef90_Q88CR7

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase M16 domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.06
Kyte-Doolittle Hydrophobicity Value -0.191
Molecular Weight (kDa) 52.6
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 454 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000362 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4958

Human Homologs

References

No references are associated with this feature.