Pseudomonas putida S16, PPS_4972

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4972
Name
Replicon chromosome
Genomic location 5643424 - 5643963 (+ strand)

Cross-References

RefSeq YP_004704379.1
GI 339489851
Entrez 10940582
INSDC AEJ15499.1
NCBI Locus Tag PPS_4972
UniParc UPI0002173BFA
UniProtKB Acc F8FWV3
UniProtKB ID F8FWV3_PSEP6
UniRef100 UniRef100_A0A099N867
UniRef50 UniRef50_B6JFM7
UniRef90 UniRef90_V9X3D3

Product

Feature Type CDS
Coding Frame 1
Product Name
PfpI family intracellular peptidase
Synonyms
Evidence for Translation
Charge (pH 7) -8.10
Kyte-Doolittle Hydrophobicity Value -0.139
Molecular Weight (kDa) 19.2
Isoelectric Point (pI) 4.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 446 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000346 (1222 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4972

Human Homologs

References

No references are associated with this feature.