Pseudomonas putida HB3267, B479_02625

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_02625
Name
Replicon chromosome
Genomic location 617722 - 618504 (- strand)

Cross-References

RefSeq YP_007227384.1
GI 431800481
Entrez 14286932
INSDC AGA71441.1
NCBI Locus Tag B479_02625
UniParc UPI0002172782
UniProtKB Acc L0FFE3
UniProtKB ID L0FFE3_PSEPU
UniRef100 UniRef100_A0A099MSC8
UniRef50 UniRef50_W6QZP5
UniRef90 UniRef90_B1JE27

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase/reductase SDR
Synonyms
Evidence for Translation
Charge (pH 7) 13.77
Kyte-Doolittle Hydrophobicity Value 0.069
Molecular Weight (kDa) 28.7
Isoelectric Point (pI) 10.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000637 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_02625

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid dehydrogenase like 1 [Source:HGNC Symbol;Acc:HGNC:16475]
E-value: 1.6e-17
Percent Identity: 32.6

References

No references are associated with this feature.