Pseudomonas putida HB3267, B479_22305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_22305
Name
Replicon chromosome
Genomic location 4914645 - 4915202 (- strand)

Cross-References

RefSeq YP_007231293.1
GI 431804390
Entrez 14290841
INSDC AGA75350.1
NCBI Locus Tag B479_22305
UniParc UPI0002A15AF5
UniProtKB Acc L0FRR1
UniProtKB ID L0FRR1_PSEPU
UniRef100 UniRef100_A0A099N6E1
UniRef50 UniRef50_Q4KI14
UniRef90 UniRef90_Q88E60

Product

Feature Type CDS
Coding Frame 1
Product Name
ECF subfamily RNA polymerase sigma-24 factor
Synonyms
Evidence for Translation
Charge (pH 7) 4.84
Kyte-Doolittle Hydrophobicity Value -0.335
Molecular Weight (kDa) 20606.4
Isoelectric Point (pI) 9.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 336 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000147 (835 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_22305

Human Homologs

References

No references are associated with this feature.