Pseudomonas aeruginosa PAO1, PA0527.1 (rsmY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0527.1
Name
rsmY
Replicon chromosome
Genomic location 586867 - 586990 (+ strand)
CommentPost-transcriptional riboregulator.

Cross-References

Entrez 4179186
NCBI Locus Tag PA0527.1

Product

Feature Type ncRNA
Product Name
regulatory RNA RsmY
Product Name Confidence: Class 1
Evidence for Translation

Subcellular localization

Additional evidence for subcellular localization

Pathogen Association Analysis

References

RsmY, a small regulatory RNA, is required in concert with RsmZ for GacA-dependent expression of biocontrol traits in Pseudomonas fluorescens CHA0.
Valverde C, Heeb S, Keel C, Haas D
Mol Microbiol 2003 Nov;50(4):1361-79
PubMed ID: 14622422
Two GacA-dependent small RNAs modulate the quorum-sensing response in Pseudomonas aeruginosa.
Kay E, Humair B, Dénervaud V, Riedel K, Spahr S, Eberl L, Valverde C, Haas D
J. Bacteriol. 2006 Aug;188(16):6026-33
PubMed ID: 16885472
Detection of small RNAs in Pseudomonas aeruginosa by RNomics and structure-based bioinformatic tools.
Sonnleitner E, Sorger-Domenigg T, Madej MJ, Findeiss S, Hackermüller J, Hüttenhofer A, Stadler PF, Bläsi U, Moll I
Microbiology (Reading, Engl.) 2008 Oct;154(Pt 10):3175-87
PubMed ID: 18832323