Pseudomonas aeruginosa UCBPP-PA14, PA14_71470 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_71470
Name
soxB
Replicon chromosome
Genomic location 6368287 - 6369537 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_793891.1
GI 116053564
Entrez 4380600
INSDC ABJ14800.1
NCBI Locus Tag PA14_71470
UniParc UPI00006D89FF
UniProtKB Acc Q02DU5
UniProtKB ID Q02DU5_PSEAB
UniRef100 UniRef100_W0Z3M3
UniRef50 UniRef50_O87388
UniRef90 UniRef90_Q9HTE8

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase beta subunit
Synonyms
Evidence for Translation
Charge (pH 7) 4.72
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 45.2
Isoelectric Point (pI) 8.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 326 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004970 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_71470
Search term: soxB

Human Homologs

References

No references are associated with this feature.