Pseudomonas aeruginosa UCBPP-PA14, PA14_73400 (trmE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_73400
Name
trmE
Replicon chromosome
Genomic location 6533634 - 6535001 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_794045.1
GI 116053718
Entrez 4384096
INSDC ABJ14954.1
NCBI Locus Tag PA14_73400
UniParc UPI000045D35D
UniProtKB Acc Q02DE1
UniProtKB ID MNME_PSEAB
UniRef100 UniRef100_Q02DE1
UniRef50 UniRef50_Q9CLQ1
UniRef90 UniRef90_Q9HT07

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA modification GTPase TrmE
Synonyms
Evidence for Translation
Charge (pH 7) -19.21
Kyte-Doolittle Hydrophobicity Value -0.093
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005098 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_73400
Search term: trmE

Human Homologs

Ensembl 110, assembly GRCh38.p14
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value: 4.4e-63
Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value: 4.4e-63
Percent Identity: 38.5

References

No references are associated with this feature.