Pseudomonas aeruginosa PA7, PSPA7_0344 (gabT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0344
Name
gabT
Replicon chromosome
Genomic location 354631 - 355911 (+ strand)

Cross-References

RefSeq YP_001345739.1
GI 152986520
EC Number 2.6.1.19
Entrez 5359852
INSDC ABR83703.1
NCBI Locus Tag PSPA7_0344
UniParc UPI00000C4FCE
UniProtKB Acc A6UY54
UniProtKB ID A6UY54_PSEA7
UniRef100 UniRef100_Q9I6M4
UniRef50 UniRef50_P50457
UniRef90 UniRef90_Q9I6M4

Product

Feature Type CDS
Coding Frame 1
Product Name
4-aminobutyrate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -3.00
Kyte-Doolittle Hydrophobicity Value 0.142
Molecular Weight (kDa) 45.2
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000263 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0344
Search term: gabT

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 2.4e-47
Percent Identity: 32.1

References

No references are associated with this feature.