Pseudomonas aeruginosa DK2, PADK2_01185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa DK2
GCF_000271365.1|latest
Locus Tag
PADK2_01185
Name
Replicon chromosome
Genomic location 263268 - 264533 (- strand)

Cross-References

RefSeq YP_006480234.1
GI 392981647
Entrez 13171614
NCBI Locus Tag PADK2_01185

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) 3.83
Kyte-Doolittle Hydrophobicity Value -0.428
Molecular Weight (kDa) 46.1
Isoelectric Point (pI) 8.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SZD MEMBRANE PROTEIN 07/18/11 Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) Pseudomonas aeruginosa 2.311 X-RAY DIFFRACTION 100.0
4FMS TRANSPORT PROTEIN 06/18/12 Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) in complex with glucuronate Pseudomonas aeruginosa 2.45 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1158 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PADK2_01185
Search term: porin

Human Homologs

References

No references are associated with this feature.