Pseudomonas aeruginosa DK2, PADK2_21925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_21925
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4711883 - 4713166 (+ strand) |
Cross-References
| RefSeq | YP_006484352.1 |
| GI | 392985765 |
| Entrez | 13172898 |
| NCBI Locus Tag | PADK2_21925 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
porin
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.21 |
| Kyte-Doolittle Hydrophobicity Value | -0.456 |
| Molecular Weight (kDa) | 47.0 |
| Isoelectric Point (pI) | 8.96 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 2Y0L | TRANSPORT PROTEIN | 12/03/10 | Crystal Structure of Pseudomonas Aeruginosa OpdO | PSEUDOMONAS AERUGINOSA | 2.59 | X-RAY DIFFRACTION | 99.8 |
| 3T20 | MEMBRANE PROTEIN | 07/22/11 | Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) | Pseudomonas aeruginosa | 2.6 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000729 (839 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_21925
Search term: porin
|
Human Homologs
References
No references are associated with this feature.