Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3842

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_3842
Name
Replicon	chromosome
Genomic location	4147935 - 4148693 (+ strand)

Cross-References

RefSeq	YP_004716212.1
GI	339495919
Entrez	10944885
INSDC	AEJ07123.1
NCBI Locus Tag	PSTAB_3842
UniParc	UPI00014FEF1D
UniProtKB Acc	F8H3Y8
UniProtKB ID	F8H3Y8_PSEUT
UniRef100	UniRef100_F2N5H2
UniRef50	UniRef50_Q1LQ86
UniRef90	UniRef90_F2N5H2

Product

Feature Type	CDS
Coding Frame	1
Product Name	stomatin-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.04
Kyte-Doolittle Hydrophobicity Value	-0.010
Molecular Weight (kDa)	28.3
Isoelectric Point (pI)	6.54

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 560 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000443 (485 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_3842 Search term: stomatin-like protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000368952 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420] E-value: 4.2e-55 Percent Identity: 47.8
Ensembl 110, assembly GRCh38.p14	ENSP00000401989 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420] E-value: 4.2e-55 Percent Identity: 47.8

References