Pseudomonas stutzeri DSM 10701, PSJM300_00010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest
Locus Tag
PSJM300_00010
Name
Replicon chromosome
Genomic location 1959 - 3062 (+ strand)

Cross-References

RefSeq YP_006522444.1
GI 397685125
EC Number 2.7.7.7
Entrez 13327470
NCBI Locus Tag PSJM300_00010

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -10.84
Kyte-Doolittle Hydrophobicity Value -0.119
Molecular Weight (kDa) 40550.0
Isoelectric Point (pI) 4.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Drugs Targeting this Protein

Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.

Drug Name Source Accession Source DB Version Target Accession Target Description Percent Identity Alignment Length E-Value
[(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid DB06998 DrugBank 5.1.4 P0A988 DNA polymerase III subunit beta 56.9 367 4.2e-112

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000002 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSJM300_00010

Human Homologs

References

No references are associated with this feature.