Pseudomonas mendocina NK-01, MDS_0083

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0083
Name
Replicon chromosome
Genomic location 96249 - 97760 (- strand)

Cross-References

RefSeq YP_004377866.1
GI 330500997
Entrez 10454865
INSDC AEB56114.1
NCBI Locus Tag MDS_0083
UniParc UPI000206E9B9
UniProtKB Acc F4DVY4
UniProtKB ID F4DVY4_PSEMN
UniRef100 UniRef100_F4DVY4
UniRef50 UniRef50_Q48QH2
UniRef90 UniRef90_W6QRN2

Product

Feature Type CDS
Coding Frame 1
Product Name
sulfatase
Synonyms
Evidence for Translation
Charge (pH 7) -13.93
Kyte-Doolittle Hydrophobicity Value -0.398
Molecular Weight (kDa) 57298.5
Isoelectric Point (pI) 5.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000031 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0083
Search term: sulfatase

Human Homologs

Ensembl 110, assembly GRCh38.p14
iduronate 2-sulfatase [Source:HGNC Symbol;Acc:HGNC:5389]
E-value: 5.6e-27
Percent Identity: 27.0

References

No references are associated with this feature.