Pseudomonas mendocina NK-01, MDS_1528

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_1528
Name
Replicon	chromosome
Genomic location	1667345 - 1669144 (+ strand)

Cross-References

RefSeq	YP_004379311.1
GI	330502442
Entrez	10456310
INSDC	AEB57559.1
NCBI Locus Tag	MDS_1528
UniParc	UPI000206DC3A
UniProtKB Acc	F4DY19
UniProtKB ID	F4DY19_PSEMN
UniRef100	UniRef100_F4DY19
UniRef50	UniRef50_O67618
UniRef90	UniRef90_Q87XF8

Product

Feature Type	CDS
Coding Frame	1
Product Name	GTP-binding protein LepA
Synonyms
Evidence for Translation
Charge (pH 7)	-11.05
Kyte-Doolittle Hydrophobicity Value	-0.093
Molecular Weight (kDa)	66.0
Isoelectric Point (pI)	5.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000741 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_1528 Search term: GTP-binding protein LepA

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000281543 GTP binding elongation factor GUF1 [Source:HGNC Symbol;Acc:HGNC:25799] E-value: 1.8e-173 Percent Identity: 49.8

References