Pseudomonas mendocina NK-01, MDS_1742

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1742
Name
Replicon chromosome
Genomic location 1888354 - 1889043 (+ strand)

Cross-References

RefSeq YP_004379525.1
GI 330502656
Entrez 10456524
INSDC AEB57773.1
NCBI Locus Tag MDS_1742
UniParc UPI000206E1EA
UniProtKB Acc F4E007
UniProtKB ID F4E007_PSEMN
UniRef100 UniRef100_F4E007
UniRef50 UniRef50_Q1I8J2
UniRef90 UniRef90_F4E007

Product

Feature Type CDS
Coding Frame 1
Product Name
arginine/ornithine ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) 3.22
Kyte-Doolittle Hydrophobicity Value 0.832
Molecular Weight (kDa) 24.7
Isoelectric Point (pI) 9.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000856 (1029 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1742

Human Homologs

References

No references are associated with this feature.