Pseudomonas mendocina NK-01, MDS_3242

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3242
Name
Replicon chromosome
Genomic location 3593471 - 3594295 (- strand)

Cross-References

RefSeq YP_004381025.1
GI 330504156
Entrez 10458024
INSDC AEB59273.1
NCBI Locus Tag MDS_3242
UniParc UPI000206DF97
UniProtKB Acc F4DNS7
UniProtKB ID F4DNS7_PSEMN
UniRef100 UniRef100_F4DNS7
UniRef50 UniRef50_Q16A99
UniRef90 UniRef90_A4XWK1

Product

Feature Type CDS
Coding Frame 1
Product Name
C32 tRNA thiolase
Synonyms
Evidence for Translation
Charge (pH 7) -0.98
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 6.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 407 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001150 (540 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3242
Search term: C32 tRNA thiolase

Human Homologs

References

No references are associated with this feature.