Pseudomonas syringae pv. tomato DC3000, PSPTO_0380

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0380
NCBI Old Locus Tag	PSPTO0380
Name	Synonym: PSPTO0380
Replicon	chromosome
Genomic location	420719 - 421120 (+ strand)

Cross-References

RefSeq	NP_790229.1
GI	28867610
Entrez	1181989
INSDC	AAO53924.1
NCBI Locus Tag	PSPTO_0380
NCBI Old Locus Tag	PSPTO0380
UniParc	UPI00000083F8
UniProtKB Acc	Q88AL0
UniProtKB ID	Q88AL0_PSESM
UniRef100	UniRef100_A0A038GKN8
UniRef50	UniRef50_J8WLF1
UniRef90	UniRef90_Q48CH1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.88
Kyte-Doolittle Hydrophobicity Value	1.084
Molecular Weight (kDa)	14.1
Isoelectric Point (pI)	8.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 77 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000524 (504 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0380

Human Homologs

References