Pseudomonas syringae pv. tomato DC3000, PSPTO_0555

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0555
NCBI Old Locus Tag	PSPTO0555
Name	Synonym: PSPTO0555
Replicon	chromosome
Genomic location	610670 - 611695 (+ strand)

Cross-References

RefSeq	NP_790402.1
GI	28867783
Entrez	1182165
INSDC	AAO54097.1
NCBI Locus Tag	PSPTO_0555
NCBI Old Locus Tag	PSPTO0555
UniParc	UPI00000084A0
UniProtKB Acc	Q88A42
UniProtKB ID	Q88A42_PSESM
UniRef100	UniRef100_Q88A42
UniRef50	UniRef50_Q1IG16
UniRef90	UniRef90_D7HV51

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-14.88
Kyte-Doolittle Hydrophobicity Value	-0.143
Molecular Weight (kDa)	38.7
Isoelectric Point (pI)	4.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 195 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000579 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0555

Human Homologs

References