Pseudomonas syringae pv. tomato DC3000, PSPTO_0600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0600
NCBI Old Locus TagPSPTO0600
Name
Synonym: PSPTO0600
Replicon chromosome
Genomic location 657771 - 658109 (- strand)

Cross-References

RefSeq NP_790447.1
GI 28867828
Entrez 1182211
INSDC AAO54142.1
NCBI Locus Tag PSPTO_0600
NCBI Old Locus Tag PSPTO0600
UniParc UPI00000084CD
UniProtKB Acc Q889Z7
UniProtKB ID Q889Z7_PSESM
UniRef100 UniRef100_Q889Z7
UniRef50 UniRef50_G8Q094
UniRef90 UniRef90_G8Q094

Product

Feature Type CDS
Coding Frame 1
Product Name
HIT family protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.63
Kyte-Doolittle Hydrophobicity Value -0.073
Molecular Weight (kDa) 12.7
Isoelectric Point (pI) 6.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000635 (884 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0600

Human Homologs

Ensembl 110, assembly GRCh38.p14
histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912]
E-value: 2.1e-35
Percent Identity: 56.8

References

No references are associated with this feature.