Pseudomonas syringae pv. tomato DC3000, PSPTO_1116 (cfa)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1116
NCBI Old Locus Tag	PSPTO1116
Name	cfa Synonym: PSPTO1116
Replicon	chromosome
Genomic location	1229595 - 1230863 (- strand)

Cross-References

RefSeq	NP_790950.1
GI	28868331
Entrez	1182752
INSDC	AAO54645.1
NCBI Locus Tag	PSPTO_1116
NCBI Old Locus Tag	PSPTO1116
UniParc	UPI00000086B1
UniProtKB Acc	Q888B4
UniProtKB ID	Q888B4_PSESM
UniRef100	UniRef100_Q888B4
UniRef50	UniRef50_Q48MU6
UniRef90	UniRef90_Q48MU6

Product

Feature Type	CDS
Coding Frame	1
Product Name	cyclopropane-fatty-acyl-phospholipid synthase
Synonyms
Evidence for Translation
Charge (pH 7)	0.98
Kyte-Doolittle Hydrophobicity Value	-0.125
Molecular Weight (kDa)	47.5
Isoelectric Point (pI)	7.18

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015885 (171 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1116 Search term: cfa Search term: cyclopropane-fatty-acyl-phospholipid synthase

Human Homologs

References