Pseudomonas syringae pv. tomato DC3000, PSPTO_1206

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1206
NCBI Old Locus Tag	PSPTO1206
Name	Synonym: PSPTO1206
Replicon	chromosome
Genomic location	1318800 - 1321301 (+ strand)

Cross-References

RefSeq	NP_791038.1
GI	28868419
Entrez	1182842
INSDC	AAO54733.1
NCBI Locus Tag	PSPTO_1206
NCBI Old Locus Tag	PSPTO1206
UniParc	UPI0000008705
UniProtKB Acc	Q887T0
UniProtKB ID	Q887T0_PSESM
UniRef100	UniRef100_Q887T0
UniRef50	UniRef50_Q887T0
UniRef90	UniRef90_Q887T0

Product

Feature Type	CDS
Coding Frame	1
Product Name	TonB-dependent siderophore receptor
Synonyms
Evidence for Translation
Charge (pH 7)	-19.24
Kyte-Doolittle Hydrophobicity Value	-0.389
Molecular Weight (kDa)	90.3
Isoelectric Point (pI)	4.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000149 (2669 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1206 Search term: TonB-dependent siderophore receptor

Human Homologs

References