Pseudomonas syringae pv. tomato DC3000, PSPTO_1250

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1250
NCBI Old Locus Tag	PSPTO1250
Name	Synonym: PSPTO1250
Replicon	chromosome
Genomic location	1373711 - 1374394 (+ strand)

Cross-References

RefSeq	NP_791080.1
GI	28868461
Entrez	1182886
INSDC	AAO54775.1
NCBI Locus Tag	PSPTO_1250
NCBI Old Locus Tag	PSPTO1250
UniParc	UPI000000872C
UniProtKB Acc	Q887P1
UniProtKB ID	Q887P1_PSESM
UniRef100	UniRef100_Q887P1
UniRef50	UniRef50_Q7DDH4
UniRef90	UniRef90_Q887P1

Product

Feature Type	CDS
Coding Frame	1
Product Name	CsgG family protein
Synonyms
Evidence for Translation
Charge (pH 7)	4.20
Kyte-Doolittle Hydrophobicity Value	-0.186
Molecular Weight (kDa)	24.4
Isoelectric Point (pI)	9.48

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 57 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000045 (379 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1250 Search term: CsgG family protein

Human Homologs

References