Pseudomonas syringae pv. tomato DC3000, PSPTO_1716

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1716
NCBI Old Locus Tag	PSPTO1716
Name	Synonym: PSPTO1716
Replicon	chromosome
Genomic location	1885961 - 1886533 (+ strand)

Cross-References

RefSeq	NP_791541.1
GI	28868922
Entrez	1183353
INSDC	AAO55236.1
NCBI Locus Tag	PSPTO_1716
NCBI Old Locus Tag	PSPTO1716
UniParc	UPI00000088F2
UniProtKB Acc	Q885W5
UniProtKB ID	Q885W5_PSESM
UniRef100	UniRef100_Q885W5
UniRef50	UniRef50_G8Q5K0
UniRef90	UniRef90_Q885W5

Product

Feature Type	CDS
Coding Frame	1
Product Name	alpha-ribazole-5'-phosphate phosphatase
Synonyms
Evidence for Translation
Charge (pH 7)	-7.59
Kyte-Doolittle Hydrophobicity Value	-0.091
Molecular Weight (kDa)	20.7
Isoelectric Point (pI)	4.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 425 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001227 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1716 Search term: alpha-ribazole-5'-phosphate phosphatase

Human Homologs

References