Pseudomonas syringae pv. tomato DC3000, PSPTO_1717 (cobS)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1717
NCBI Old Locus Tag	PSPTO1717
Name	cobS Synonym: PSPTO1717
Replicon	chromosome
Genomic location	1886539 - 1887270 (+ strand)

Cross-References

RefSeq	NP_791542.1
GI	28868923
Entrez	1183354
INSDC	AAO55237.1
NCBI Locus Tag	PSPTO_1717
NCBI Old Locus Tag	PSPTO1717
UniParc	UPI00000088F3
UniProtKB Acc	Q885W4
UniProtKB ID	COBS_PSESM
UniRef100	UniRef100_Q885W4
UniRef50	UniRef50_Q88M93
UniRef90	UniRef90_Q885W4

Product

Feature Type	CDS
Coding Frame	1
Product Name	cobalamin (5'-phosphate) synthase
Synonyms
Evidence for Translation
Charge (pH 7)	5.09
Kyte-Doolittle Hydrophobicity Value	1.002
Molecular Weight (kDa)	25.6
Isoelectric Point (pI)	9.33

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 331 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001228 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1717 Search term: cobS Search term: cobalamin (5'-phosphate) synthase

Human Homologs

References