Pseudomonas syringae pv. tomato DC3000, PSPTO_1732

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1732
NCBI Old Locus Tag	PSPTO1732
Name	Synonym: PSPTO1732
Replicon	chromosome
Genomic location	1899411 - 1899938 (+ strand)

Cross-References

RefSeq	NP_791557.1
GI	28868938
Entrez	1183369
INSDC	AAO55252.1
NCBI Locus Tag	PSPTO_1732
NCBI Old Locus Tag	PSPTO1732
UniParc	UPI0000008902
UniProtKB Acc	Q885U9
UniProtKB ID	Q885U9_PSESM
UniRef100	UniRef100_F3EF26
UniRef50	UniRef50_A4VK63
UniRef90	UniRef90_W0MS15

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	6.17
Kyte-Doolittle Hydrophobicity Value	-0.117
Molecular Weight (kDa)	18.8
Isoelectric Point (pI)	9.85

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 38 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000823 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1732

Human Homologs

References