Pseudomonas syringae pv. tomato DC3000, PSPTO_2936

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2936
NCBI Old Locus TagPSPTO2936
Name
Synonym: PSPTO2936
Replicon chromosome
Genomic location 3300087 - 3300842 (- strand)

Cross-References

RefSeq NP_792734.1
GI 28870115
Entrez 1184590
INSDC AAO56429.1
NCBI Locus Tag PSPTO_2936
NCBI Old Locus Tag PSPTO2936
UniParc UPI0000008D7F
UniProtKB Acc Q881F7
UniProtKB ID Y2936_PSESM
UniRef100 UniRef100_Q881F7
UniRef50 UniRef50_Q881F7
UniRef90 UniRef90_Q881F7

Product

Feature Type CDS
Coding Frame 1
Product Name
LamB/YcsF family protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.20
Kyte-Doolittle Hydrophobicity Value -0.075
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 5.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 275 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000480 (412 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2936

Human Homologs

References

No references are associated with this feature.