Pseudomonas syringae pv. tomato DC3000, PSPTO_3901

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3901
NCBI Old Locus Tag	PSPTO3901
Name	Synonym: PSPTO3901
Replicon	chromosome
Genomic location	4416569 - 4417507 (- strand)

Cross-References

RefSeq	NP_793672.1
GI	28871053
Entrez	1185574
INSDC	AAO57367.1
NCBI Locus Tag	PSPTO_3901
NCBI Old Locus Tag	PSPTO3901
UniParc	UPI000000910C
UniProtKB Acc	Q87YA0
UniProtKB ID	Q87YA0_PSESM
UniRef100	UniRef100_A0A038GA73
UniRef50	UniRef50_Q4KGI6
UniRef90	UniRef90_D7HXG9

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	11.58
Kyte-Doolittle Hydrophobicity Value	-0.202
Molecular Weight (kDa)	35.8
Isoelectric Point (pI)	9.82

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 84 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000902 (489 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3901

Human Homologs

References