Pseudomonas syringae pv. tomato DC3000, PSPTO_3909

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3909
NCBI Old Locus Tag	PSPTO3909
Name	Synonym: PSPTO3909
Replicon	chromosome
Genomic location	4423780 - 4424568 (- strand)

Cross-References

RefSeq	NP_793680.1
GI	28871061
Entrez	1185582
INSDC	AAO57375.1
NCBI Locus Tag	PSPTO_3909
NCBI Old Locus Tag	PSPTO3909
UniParc	UPI0000009114
UniProtKB Acc	Q87Y92
UniProtKB ID	Q87Y92_PSESM
UniRef100	UniRef100_Q87Y92
UniRef50	UniRef50_G8PZF6
UniRef90	UniRef90_G8PZF6

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.07
Kyte-Doolittle Hydrophobicity Value	-0.191
Molecular Weight (kDa)	29.2
Isoelectric Point (pI)	4.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 156 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001250 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3909

Human Homologs

References