Pseudomonas syringae pv. tomato DC3000, PSPTO_4046

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4046
NCBI Old Locus Tag	PSPTO4046
Name	Synonym: PSPTO4046
Replicon	chromosome
Genomic location	4552631 - 4556299 (- strand)

Cross-References

RefSeq	NP_793808.1
GI	28871189
Entrez	1185726
INSDC	AAO57503.1
NCBI Locus Tag	PSPTO_4046
NCBI Old Locus Tag	PSPTO4046
UniParc	UPI0000009188
UniProtKB Acc	Q87XX8
UniProtKB ID	Q87XX8_PSESM
UniRef100	UniRef100_Q87XX8
UniRef50	UniRef50_Q87XX8
UniRef90	UniRef90_Q87XX8

Product

Feature Type	CDS
Coding Frame	1
Product Name	tail tape measure protein
Synonyms
Evidence for Translation
Charge (pH 7)	11.79
Kyte-Doolittle Hydrophobicity Value	-0.189
Molecular Weight (kDa)	127.0
Isoelectric Point (pI)	9.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 84 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000619 (264 members)
Putative Inparalogs	3 predicted inparalogs hypothetical protein (PSPTO_0296) 97.2% identity tail length tape measure protein, internal deletion (PSPTO_2082) 54.7% identity hypothetical protein (PSPTO_0296) 97.2% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4046 Search term: tail tape measure protein

Human Homologs

References