Pseudomonas syringae pv. tomato DC3000, PSPTO_4225 (nadB)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4225
NCBI Old Locus Tag	PSPTO4225
Name	nadB Synonym: PSPTO4225
Replicon	chromosome
Genomic location	4758704 - 4760320 (+ strand)

Cross-References

RefSeq	NP_793986.1
GI	28871367
Entrez	1185905
INSDC	AAO57681.1
NCBI Locus Tag	PSPTO_4225
NCBI Old Locus Tag	PSPTO4225
UniParc	UPI0000009238
UniProtKB Acc	Q87XF3
UniProtKB ID	Q87XF3_PSESM
UniRef100	UniRef100_Q87XF3
UniRef50	UniRef50_P10902
UniRef90	UniRef90_D7I4M4

Product

Feature Type	CDS
Coding Frame	1
Product Name	L-aspartate oxidase
Synonyms
Evidence for Translation
Charge (pH 7)	-18.46
Kyte-Doolittle Hydrophobicity Value	-0.208
Molecular Weight (kDa)	59.8
Isoelectric Point (pI)	5.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000735 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4225 Search term: nadB Search term: L-aspartate oxidase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000264932 succinate dehydrogenase complex flavoprotein subunit A [Source:HGNC Symbol;Acc:HGNC:10680] E-value: 2.4e-60 Percent Identity: 31.4

References