Pseudomonas syringae pv. tomato DC3000, PSPTO_4296

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4296
NCBI Old Locus Tag	PSPTO4296
Name	Synonym: PSPTO4296
Replicon	chromosome
Genomic location	4842839 - 4844164 (+ strand)

Cross-References

RefSeq	NP_794052.1
GI	28871433
Entrez	1185977
INSDC	AAO57747.1
NCBI Locus Tag	PSPTO_4296
NCBI Old Locus Tag	PSPTO4296
UniParc	UPI0000009275
UniProtKB Acc	Q87X92
UniProtKB ID	Q87X92_PSESM
UniRef100	UniRef100_Q87X92
UniRef50	UniRef50_P0AEX3
UniRef90	UniRef90_Q3K7Q8

Product

Feature Type	CDS
Coding Frame	1
Product Name	metabolite-proton symporter
Synonyms
Evidence for Translation
Charge (pH 7)	12.55
Kyte-Doolittle Hydrophobicity Value	0.501
Molecular Weight (kDa)	48.5
Isoelectric Point (pI)	9.60

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 342 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005063 (498 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4296 Search term: metabolite-proton symporter

Human Homologs

References