Pseudomonas syringae pv. tomato DC3000, PSPTO_4304 (saxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4304
NCBI Old Locus TagPSPTO4304
Name
saxB
Synonym: PSPTO4304
Replicon chromosome
Genomic location 4851676 - 4854810 (+ strand)

Cross-References

RefSeq NP_794060.1
GI 28871441
Entrez 1185985
INSDC AAO57755.1
NCBI Locus Tag PSPTO_4304
NCBI Old Locus Tag PSPTO4304
UniParc UPI000000927D
UniProtKB Acc Q87X84
UniProtKB ID Q87X84_PSESM
UniRef100 UniRef100_Q87X84
UniRef50 UniRef50_P24177
UniRef90 UniRef90_Q48EP3

Product

Feature Type CDS
Coding Frame 1
Product Name
isothiocyanate resistance protein SaxB; isochorismatase family
Synonyms
Evidence for Translation
Charge (pH 7) -6.13
Kyte-Doolittle Hydrophobicity Value 0.305
Molecular Weight (kDa) 112.3
Isoelectric Point (pI) 5.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 765.8 42.69 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4304
Search term: saxB

Human Homologs

References

No references are associated with this feature.