Pseudomonas syringae pv. tomato DC3000, PSPTO_4788 (kptA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4788
NCBI Old Locus TagPSPTO4788
Name
kptA
Synonym: PSPTO4788
Replicon chromosome
Genomic location 5427872 - 5428435 (+ strand)

Cross-References

RefSeq NP_794523.1
GI 28871904
Entrez 1186471
INSDC AAO58218.1
NCBI Locus Tag PSPTO_4788
NCBI Old Locus Tag PSPTO4788
UniParc UPI000000942F
UniProtKB Acc Q87VZ5
UniProtKB ID KPTA_PSESM
UniRef100 UniRef100_Q87VZ5
UniRef50 UniRef50_Q87VZ5
UniRef90 UniRef90_Q87VZ5

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA 2'-phosphotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -6.11
Kyte-Doolittle Hydrophobicity Value -0.457
Molecular Weight (kDa) 20.9
Isoelectric Point (pI) 5.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 127 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000053 (283 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4788
Search term: kptA

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA phosphotransferase 1 [Source:HGNC Symbol;Acc:HGNC:20316]
E-value: 2.0e-14
Percent Identity: 33.5

References

No references are associated with this feature.