Pseudomonas syringae pv. tomato DC3000, PSPTO_5030

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5030
NCBI Old Locus Tag	PSPTO5030
Name	Synonym: PSPTO5030
Replicon	chromosome
Genomic location	5727198 - 5733161 (- strand)

Cross-References

RefSeq	NP_794763.1
GI	28872144
Entrez	1186715
INSDC	AAO58458.1
NCBI Locus Tag	PSPTO_5030
NCBI Old Locus Tag	PSPTO5030
UniParc	UPI000000951B
UniProtKB Acc	Q87VA9
UniProtKB ID	Q87VA9_PSESM
UniRef100	UniRef100_Q87VA9
UniRef50	UniRef50_Q4ZZ60
UniRef90	UniRef90_Q4ZZ60

Product

Feature Type	CDS
Coding Frame	1
Product Name	sensor histidine kinase/response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-119.80
Kyte-Doolittle Hydrophobicity Value	-0.121
Molecular Weight (kDa)	218.8
Isoelectric Point (pI)	4.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 622 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000404 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5030 Search term: sensor histidine kinase/response regulator

Human Homologs

References