Pseudomonas syringae pv. tomato DC3000, PSPTO_5352

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5352
NCBI Old Locus Tag	PSPTO5352
Name	Synonym: PSPTO5352
Replicon	chromosome
Genomic location	6084300 - 6085646 (+ strand)

Cross-References

RefSeq	NP_795082.1
GI	28872463
Entrez	1187038
INSDC	AAO58777.1
NCBI Locus Tag	PSPTO_5352
NCBI Old Locus Tag	PSPTO5352
UniParc	UPI0000009654
UniProtKB Acc	Q87UE7
UniProtKB ID	Q87UE7_PSESM
UniRef100	UniRef100_Q87UE7
UniRef50	UniRef50_Q48C69
UniRef90	UniRef90_Q48C69

Product

Feature Type	CDS
Coding Frame	1
Product Name	methyl-accepting chemotaxis protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.14
Kyte-Doolittle Hydrophobicity Value	-0.267
Molecular Weight (kDa)	48.9
Isoelectric Point (pI)	6.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001343 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5352 Search term: methyl-accepting chemotaxis protein

Human Homologs

References